HTLV1 Target gene Detail Information

> SRGAP2D Gene Search Result


Gene Information
Gene Name SRGAP2D
Gene ID 100996712
Gene Full Name SLIT-ROBO Rho GTPase activating protein 2D (pseudogene)
Gene Alias -
Virus HTLV1
Gene Type pseudo
HGNC ID HGNC:43932
OMIM ID 614705
Summary This locus encodes a member of the SLIT-ROBO Rho GTPase activating protein family. This human-specific locus resulted from segmental duplication of the SLIT-ROBO Rho GTPase activating protein 2B locus. This duplicated locus lacks an internal exon, and thus this gene copy may not be functional. Expression of this locus appears to be much lower than the similar SLIT-ROBO Rho GTPase activating protein 2C (SRGAP2C) locus. The SRGAP2C locus has been shown to encode a protein that functions antagonistically to SLIT-ROBO Rho GTPase activating protein 2 in cortical neuron development. [provided by RefSeq, May 2014]
Target gene [SRGAP2D] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6016843 chr1 11 0 0 11 View

Target gene [SRGAP2D] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SRGAP2D peak across samples

Peak Plot