HBV Target gene Detail Information

> TENM1 Gene Search Result


Gene Information
Gene Name TENM1
Gene ID 10178
Gene Full Name teneurin transmembrane protein 1
Gene Alias ODZ1|ODZ3|TEN-M1|TEN1|TNM|TNM1|ten-1
Transcripts ENSG00000009694
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Plasma membrane;
Membrane Info Predicted membrane proteins, Transporters
Uniport_ID Q9UKZ4
HGNC ID HGNC:8117
OMIM ID 300588
Summary The protein encoded by this gene belongs to the tenascin family and teneurin subfamily. It is expressed in the neurons and may function as a cellular signal transducer. Several alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2009]
Target gene [TENM1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1017318 chrX 1 0 0 1 View
1040832 chrX 21 3 0 24 View
1040833 chrX 19 3 0 22 View
1043515 chrX 1 1 1 3 View
1043516 chrX 4 18 0 22 View
1043517 chrX 2 0 0 2 View

Target gene [TENM1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
 
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
E
  GSE94660 		RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - TENM1 expression across samples

Volcano Plot

Bar Plot

> Dataset: GSE94660 - TENM1 expression across samples

Volcano Plot

Bar Plot