HPV Target gene Detail Information

> TFAP2A-AS2 Gene Search Result


Gene Information
Gene Name TFAP2A-AS2
Gene ID 109729173
Gene Full Name TFAP2A antisense RNA 2
Gene Alias HIPSTR
Transcripts ENSG00000285278
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:52289
OMIM ID 617136
Summary The product of this intronless gene is a capped lncRNA that is nuclear-enriched and associated with chromatin. The encoded transcript may be involved in the regulation of developmental gene expression in a context-dependent manner, functioning as a repressor in non-pluripotent cells and an activator in pluripotent cells. Transcription of this gene is activated in 8-cell human embryos during the major wave of zygotic genome activation, independently of and prior to the activation of TFAP2A, an overlapping gene found on the opposite strand. Expression of this gene is characterized by high cell-to-cell variability in the cells of totipotent human embryos and in stable cell lines. [provided by RefSeq, Mar 2017]
Target gene [TFAP2A-AS2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5017715 chr6 19 8 19 46 View

Target gene [TFAP2A-AS2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - TFAP2A-AS2 peak across samples

Peak Plot

> Dataset: GSE143026 - TFAP2A-AS2 peak across samples

Peak Plot