HIV Target Gene Summary

  The Target Genes module provides information on selected target genes affected by viral gene/protein/region or viral fragment integration.

• The Impact column in the table provides information on whether the gene has been mentioned by mutation or integration-related studies.
• The Description column in the table provides information on whether the gene provides viral-related omics data (what levels of data are included) and whether the gene provides figures to visualize the analysis results.


Gene name initials:
A
 |
B
 |
C
 |
D
 |
E
 |
F
 |
G
 |
H
 |
I
 |
J
 |
K
 |
L
 |
M
 |
N
 |
O
 |
P
 |
Q
 |
R
 |
S
 |
T
 |
U
 |
V
 |
W
 |
X
 |
Y
 |
Z
 |
 
ID Target gene Virus Impact Literature Count Description Detail
1 JAK1 HIV
I
 2
E
S
C
M
F
 View
2 JAK2 HIV
I
 2
E
S
C
M
F
 View
3 JAKMIP3 HIV
I
 1
E
C
M
F
 View
4 JAML HIV
I
 3
E
S
C
M
F
 View
5 JARID2 HIV
I
 1
E
S
C
M
F
 View
6 JAZF1 HIV
I
 1
E
S
C
M
F
 View
7 JMJD1C HIV
I
 2
E
S
C
M
F
 View
8 JMJD6 HIV
I
 1
E
S
C
M
F
 View
9 JMJD8 HIV
I
 1
E
S
C
M
F
 View
10 JMY HIV
I
 1
E
S
C
M
F
 View
11 JOSD1 HIV
I
 2
E
S
C
M
F
 View
12 JPT1 HIV
I
 1
E
S
C
M
F
 View
13 JPT2 HIV
I
 3
E
C
M
F
 View
14 JPX HIV
I
 1
E
S
C
M
F
 View
15 JRKL-AS1 HIV
I
 1
E
C
M
F
 View

Contents Description and
Data Download
Table Note
I
Target gene is affected by virus integration.
M
Target gene is associated with the virus gene/protein/region.
E
Target gene is detected in the expression profiling data.
S
Target gene is detected in the single-cell transcriptome data.
C
Target gene is detected in the genome binding/occupancy profiling data.
M
Target gene is detected in the methylation profiling data.
F
Target gene provides figures to visualize the analysis results.
F indicates that this gene has visualization results on at least one type of sequencing data.