HTLV1 Target gene Detail Information

> AFG2A Gene Search Result


Gene Information
Gene Name AFG2A
Gene ID 166378
Gene Full Name AFG2 AAA ATPase homolog A
Gene Alias AFG2|EHLMRS|NEDHSB|SPAF|SPATA5
Transcripts ENSG00000145375
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Disease related genes, Enzymes, Human disease related genes, Potential drug targets, Predicted intracellular proteins
Uniport_ID Q8NB90
HGNC ID HGNC:18119
OMIM ID 613940
Summary This gene encodes a member of the ATPase associated with diverse activities family, whose members are defined by a highly conserved ATPase domain. Members of this family participate in diverse cellular processes that include membrane fusion, DNA replication, microtubule severing, and protein degradation. The protein encoded by this gene has a putative mitochondrial targeting sequence and has been proposed to function in maintenance of mitochondrial function and integrity during mouse spermatogenesis. Allelic variants in this gene have been associated with epilepsy, hearing loss, and cognitive disability syndrome. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2016]
Target gene [AFG2A] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002595 chr4 28 179 19 226 View
6005430 chr4 36 24 28 88 View
6012267 chr4 20 3 0 23 View
6012268 chr4 20 3 0 23 View
6016919 chr4 6 1 4 11 View
6019850 chr4 7 0 0 7 View
6023740 chr4 3 0 1 4 View
6025647 chr4 0 3 0 3 View
6028999 chr4 0 1 0 1 View

Target gene [AFG2A] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - AFG2A peak across samples

Peak Plot