Virus Dataset Detail

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Dataset Information
Accession GSE52244
Status 2015/11/1
Title Exon-expression profiling of CD4+ T cells derived from HTLV-1-infected individuals with or without malignancy
Organism Homo sapiens
Experiment type Expression profiling by array
Summary T-cell clones were obtained by limiting dilution culture of PBMC of HTLV-1 carriers. Exon expression profiling was performed using Affymetrix exon array (Affymetrix Human Exon 1.0 ST Array) according to the manufacturer's instructions. Gene version of CEL files 01 to 12 are presented in GSE46518.
Samples
GSM ID Sample info Characteristics Description
GSM1261741 ExVivo_TCD4+_HTLV1negative_2 [exon level] tissue:monoclonal T-cell clone; cell type:TCD4+; htlv1 infection:no; activated by pha:no -
GSM1261742 ExVivo_TCD4+_HTLV1negative_1 [exon level] tissue:monoclonal T-cell clone; cell type:TCD4+; htlv1 infection:no; activated by pha:yes -
GSM1261743 ExVivo_TCD4+_HTLV1negative_4 [exon level] tissue:monoclonal T-cell clone; cell type:TCD4+; htlv1 infection:no; activated by pha:no -
GSM1261744 ExVivo_TCD4+_HTLV1negative_3 [exon level] tissue:monoclonal T-cell clone; cell type:TCD4+; htlv1 infection:no; activated by pha:yes -
GSM1261745 ExVivo_TCD4+_HTLV1positive_5 [exon level] tissue:monoclonal T-cell clone; cell type:TCD4+; htlv1 infection:yes; activated by pha:no -
GSM1261746 ExVivo_TCD4+_HTLV1positive_6 [exon level] tissue:monoclonal T-cell clone; cell type:TCD4+; htlv1 infection:yes; activated by pha:yes -
GSM1261747 ExVivo_TCD4+_HTLV1positive_4 [exon level] tissue:monoclonal T-cell clone; cell type:TCD4+; htlv1 infection:yes; activated by pha:no -
GSM1261748 ExVivo_TCD4+_HTLV1positive_3 [exon level] tissue:monoclonal T-cell clone; cell type:TCD4+; htlv1 infection:yes; activated by pha:yes -
GSM1261749 ExVivo_TCD4+_HTLV1positive_2 [exon level] tissue:monoclonal T-cell clone; cell type:TCD4+; htlv1 infection:yes; activated by pha:no -
GSM1261750 ExVivo_TCD4+_HTLV1positive_1 [exon level] tissue:monoclonal T-cell clone; cell type:TCD4+; htlv1 infection:yes; activated by pha:yes -
GSM1261751 ExVivo_TCD4+_HTLV1negative_6 [exon level] tissue:monoclonal T-cell clone; cell type:TCD4+; htlv1 infection:no; activated by pha:no -
GSM1261752 ExVivo_TCD4+_HTLV1negative_5 [exon level] tissue:monoclonal T-cell clone; cell type:TCD4+; htlv1 infection:no; activated by pha:yes -
GSM1261753 ATLL cells_1 [exon level] tissue:monoclonal T-cell clone; cell type:TCD4+; htlv1 infection:yes; activated by pha:no -
GSM1261754 ATLL cells_2 [exon level] tissue:monoclonal T-cell clone; cell type:TCD4+; htlv1 infection:yes; activated by pha:no -
GSM1261755 ATLL cells_3 [exon level] tissue:monoclonal T-cell clone; cell type:TCD4+; htlv1 infection:yes; activated by pha:no -
Platform GPL5188  : [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
Literature 25519886  
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* p<0.05 ** p<0.01