DENV-ralated Dataset Summary

This module is dedicated to providing researchers with comprehensive and detailed virus-related omics data from the public databases. The current version brings together virus related transcriptome, epigenome and genome data. The experiment types include: Expression profiling by high throughput sequencing/array, Methylation profiling by high throughput sequencing/array/genome tiling array, Genome binding/occupancy profiling by genome tiling array and Genome variation profiling by high throughput sequencing, etc.
The following labels indicate that this dataset has analysis data/figure/literature.
X
 xCell analysis  
E
 Differential expression analysis  
M
 Differential methylation analysis  
C
 Genome binding/occupancy profiling analysis  
S
 scRNA analysis  
L
 Literature  


Dataset Summary
Accession Virus Title Experiment Type Platform ID Samples Data Availability Detail
GSE110511 Dengue fever virus (DENV) Leo1 occupancy in presence of dengue virus NS5 Chip-seq GPL20301 24
C
Detail
GSE130891 Dengue fever virus (DENV);Hepatitis D virus (HDV);Zika virus (ZIKV) MeRIP-seq for host response to Flaviviridae infection MeRIP-seq GPL16791 48
L
Detail
GSE132367 Dengue fever virus (DENV) Molecular signatures of dengue virus-specific IL-10/IFN-γ co-producing CD4 T cells and their association with severe dengue disease RNA-seq GPL16791 57
X
E
L
Detail
GSE152255 Dengue fever virus (DENV) Myeloid regulation signature persists after virus clearance in mild human primary dengue serotype 2 infection RNA-seq GPL11154 99
X
E
L
Detail
GSE152641 Dengue fever virus (DENV);Ebola virus;Influenza Virus (IV);Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Transcriptomic Similarities and Differences in Host Response between SARS-CoV-2 and Other Viral Infection RNA-seq GPL24676 86
X
E
L
Detail
GSE154386 Dengue fever virus (DENV) Temporally integrated single cell RNA sequencing analysis of controlled and natural DENV-1 infections scRNA-seq GPL24676 30
S
L
Detail
GSE155672 Dengue fever virus (DENV) Innate Lymphoid Cells Activation and Transcriptomic Changes in Response to Human Dengue Infection RNA-seq GPL20795 12
X
E
L
Detail
GSE226865 Dengue fever virus (DENV) Structure-first identification of RNA elements that regulate dengue virus genome architecture and replication Structure GPL33221
GPL33222
GPL33223
GPL33224
12
L
Detail
GSE279208 Dengue fever virus (DENV) Unraveling potential gene biomarkers for dengue infection through RNA sequencing RNA-seq GPL28038 26
X
E
L
Detail

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