MCV-ralated Dataset Summary

This module is dedicated to providing researchers with comprehensive and detailed virus-related omics data from the public databases. The current version brings together virus related transcriptome, epigenome and genome data. The experiment types include: Expression profiling by high throughput sequencing/array, Methylation profiling by high throughput sequencing/array/genome tiling array, Genome binding/occupancy profiling by genome tiling array and Genome variation profiling by high throughput sequencing, etc.
The following labels indicate that this dataset has analysis data/figure/literature.
X
 xCell analysis  
E
 Differential expression analysis  
M
 Differential methylation analysis  
C
 Genome binding/occupancy profiling analysis  
S
 scRNA analysis  
L
 Literature  


Dataset Summary
Accession Virus Title Experiment Type Platform ID Samples Data Availability Detail
GSE117988 Merkel Cell Polyomavirus (MCV) scRNAseq reveals mechanisms of Merkel cell carcinoma acquired immunotherapy resistance [1] scRNA-seq GPL16791 6
S
L
Detail
GSE118056 Merkel Cell Polyomavirus (MCV) scRNAseq reveals mechanisms of Merkel cell carcinoma acquired immunotherapy resistance [2] scRNA-seq GPL24676 4
S
L
Detail
GSE124856 Merkel Cell Polyomavirus (MCV) Genome-wide maps of LSD1-RCOR2 binding in Merkel cell carcinoma cells Chip-seq GPL18573 8
C
L
Detail
GSE136867 Merkel Cell Polyomavirus (MCV) Conversion of Sox2-Dependent Merkel Cell Carcinoma to a Differentiated Neuron-like Phenotype by T Antigen Inhibition scRNA-seq GPL18573 2
S
L
Detail
GSE147406 Merkel Cell Polyomavirus (MCV) Polyomavirus and neuroendocrine regulomes converge to establish tumor dependencies Chip-seq GPL18573 39
C
Detail
GSE226438 Merkel Cell Polyomavirus (MCV) Single cell RNA-seq profiling of patient-derived Merkel cell carcinoma tumor samples scRNA-seq GPL24676 11
S
L
Detail
GSE227054 Merkel Cell Polyomavirus (MCV) Cancer-specific CD8 T cell frequency at baseline in blood correlates with response to PD-1 blockade in Merkel cell carcinoma scRNA-seq GPL24676 14
L
Detail
GSE227708 Merkel Cell Polyomavirus (MCV) Cancer-specific CD8 T cell frequency at baseline in blood correlates with response to PD-1 blockade in Merkel cell carcinoma scRNA-seq GPL24676 16
S
L
Detail
GSE227709 Merkel Cell Polyomavirus (MCV) STING agonism leads to durable clinical response in an anti-PD-L1 refractory patient: Tumor antigen-specific, single cell level biomarker analyses scRNA-seq GPL24676 6
S
L
Detail
GSE230758 Merkel Cell Polyomavirus (MCV) Merkel cell polyomavirus small tumor antigen contributes to immune evasion by interfering with type I interferon signaling [ChIP-Seq] Chip-seq GPL16791 20
C
Detail
GSE69877 Merkel Cell Polyomavirus (MCV) MCPyV ST, MAX and the TRRAP complex cooperate to bind to Transcription Start Sites Chip-seq GPL11154
GPL18573
10
C
L
Detail

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