HTLV1-ralated Dataset Summary

This module is dedicated to providing researchers with comprehensive and detailed virus-related omics data from the public databases. The current version brings together virus related transcriptome, epigenome and genome data. The experiment types include: Expression profiling by high throughput sequencing/array, Methylation profiling by high throughput sequencing/array/genome tiling array, Genome binding/occupancy profiling by genome tiling array and Genome variation profiling by high throughput sequencing, etc.
The following labels indicate that this dataset has analysis data/figure/literature.
X
 xCell analysis  
E
 Differential expression analysis  
M
 Differential methylation analysis  
C
 Genome binding/occupancy profiling analysis  
S
 scRNA analysis  
L
 Literature  


Dataset Summary
Accession Virus Title Experiment Type Platform ID Samples Data Availability Detail
GSE10789 Human T-cell Lymphotropic Virus type 1 (HTLV1) Induction of the IL-9 gene by HTLV-I Tax stimulates the spontaneous proliferation of primary adult T-cell leukemia cells Expression array GPL3779 6
X
E
L
Detail
GSE136189 Human T-cell Lymphotropic Virus type 1 (HTLV1) Genome-wide methylation analysis of T-cells using Infinium HumanMethylation BeadChip Methylation profiling (Array) GPL13534
GPL23976
40
M
Detail
GSE138342 Human T-cell Lymphotropic Virus type 1 (HTLV1) Epigenetic pattern after EZH1,2 inhibition in lymohoma cells ChIP-on-chip GPL19784 117
L
Detail
GSE168557 Human T-cell Lymphotropic Virus type 1 (HTLV1) Highly selective HSP90 inhibitor, pimitespib, demonstrates its potent growth suppressive activity to adult T-cell leukemia in preclinical models (Pt1-3) Expression array GPL16699 6
X
E
L
Detail
GSE172194 Human T-cell Lymphotropic Virus type 1 (HTLV1) Epigenomic Regulation of Human T-Cell Leukemia Virus by Chromatin-Insulator CTCF Chip-seq GPL30008 24
L
Detail
GSE189602 Human T-cell Lymphotropic Virus type 1 (HTLV1) DNA demethylating agents and EZH2 inhibitors for Adult T cell leukemia [Illumina] Methylation profiling (Array) GPL21145 4
M
L
Detail
GSE19080 Human T-cell Lymphotropic Virus type 1 (HTLV1) Gene expression profiling in patients infected with HTLV-1: Identification of ATL and HAM/TSP-specific genetic profiles Expression array GPL9686 38
E
Detail
GSE224047 Human T-cell Lymphotropic Virus type 1 (HTLV1) RNAseq-differentiated gene expression profile of people living with HTLV-1 in the Brazilian Amazon region: a pilot study RNA-seq GPL18573 10
X
E
Detail
GSE52244 Human T-cell Lymphotropic Virus type 1 (HTLV1) Exon-expression profiling of CD4+ T cells derived from HTLV-1-infected individuals with or without malignancy Expression array GPL5188 15
X
E
L
Detail
GSE71450 Human T-cell Lymphotropic Virus type 1 (HTLV1) Genome-wide epigenetic alteration in adult T-cell leukemia cells and HTLV-1-mediated immortalized cells ChIP-on-chip GPL19784 17
L
Detail
GSE94732 Human T-cell Lymphotropic Virus type 1 (HTLV1) Targeting the HBZ Viral Oncoprotein Transcriptional Network in Adult T-cell leukemia/lymphoma (ChIP-Seq) Chip-seq GPL18573
GPL23049
24
C
L
Detail

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