IV-ralated Dataset Summary

This module is dedicated to providing researchers with comprehensive and detailed virus-related omics data from the public databases. The current version brings together virus related transcriptome, epigenome and genome data. The experiment types include: Expression profiling by high throughput sequencing/array, Methylation profiling by high throughput sequencing/array/genome tiling array, Genome binding/occupancy profiling by genome tiling array and Genome variation profiling by high throughput sequencing, etc.
The following labels indicate that this dataset has analysis data/figure/literature.
X
 xCell analysis  
E
 Differential expression analysis  
M
 Differential methylation analysis  
C
 Genome binding/occupancy profiling analysis  
S
 scRNA analysis  
L
 Literature  


Dataset Summary
Accession Virus Title Experiment Type Platform ID Samples Data Availability Detail
GSE113702 Influenza Virus (IV) H3K27ac profiling of human tracheobronchial epithelial cells during infection with H1N1, H3N2, and H5N1 influenza virus [ChIP-seq] Chip-seq GPL18573
GPL20301
52
C
Detail
GSE135069 Influenza Virus (IV) Antiviral potential of human IFN-α subtypes against influenza H3N2 infection in human lung explants RNA-seq GPL24676 10
X
E
L
Detail
GSE152641 Dengue fever virus (DENV);Ebola virus;Influenza Virus (IV);Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Transcriptomic Similarities and Differences in Host Response between SARS-CoV-2 and Other Viral Infection RNA-seq GPL24676 86
X
E
L
Detail
GSE156060 Influenza Virus (IV) Influenza non-structural protein 1 (NS1) localization plays a key role in the anatagonism of host antiviral processes Chip-seq
RNA-seq
GPL24676 28
X
E
C
Detail
GSE162632 Influenza Virus (IV) Single-cell RNA-sequencing reveals pervasive but highly cell type-specific genetic ancestry effects on the response to viral infection scRNA-seq GPL24676 292
S
L
Detail
GSE191176 Influenza Virus (IV) A novel anti-influenza combined therapy assessed by single cell RNA-sequencing scRNA-seq GPL20301 6
S
L
Detail
GSE197949 Influenza Virus (IV) Human alveolar progenitors generate dual lineage bronchioalveolar organoids scRNA-seq GPL18573 30
S
L
Detail
GSE225704 Influenza Virus (IV) Genome graphs detect human polymorphisms in active epigenomic state during influenza infection [ATAC-seq] ATAC-seq GPL24676 3
C
L
Detail
GSE225706 Influenza Virus (IV) Genome graphs detect human polymorphisms in active epigenomic state during influenza infection [ChIP-seq] Chip-seq GPL24676 6
C
L
Detail
GSE243629 Influenza Virus (IV) A single-cell atlas of the peripheral immune response in patients with influenza A virus infection scRNA-seq GPL24676 11
S
L
Detail

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