ZIKV-ralated Dataset Summary

This module is dedicated to providing researchers with comprehensive and detailed virus-related omics data from the public databases. The current version brings together virus related transcriptome, epigenome and genome data. The experiment types include: Expression profiling by high throughput sequencing/array, Methylation profiling by high throughput sequencing/array/genome tiling array, Genome binding/occupancy profiling by genome tiling array and Genome variation profiling by high throughput sequencing, etc.
The following labels indicate that this dataset has analysis data/figure/literature.
X
 xCell analysis  
E
 Differential expression analysis  
M
 Differential methylation analysis  
C
 Genome binding/occupancy profiling analysis  
S
 scRNA analysis  
L
 Literature  


Dataset Summary
Accession Virus Title Experiment Type Platform ID Samples Data Availability Detail
GSE105884 Zika virus (ZIKV) Transcriptomic profile of circulating CD8 T cells in donors with ZIKV infection RNA-seq GPL16791 60
X
E
L
Detail
GSE123835 Zika virus (ZIKV) Zika virus antagonizes interferon response in patients and disrupts RIG-I-MAVS interaction through its CARD-TM domains RNA-seq GPL16791 6
X
E
L
Detail
GSE130891 Dengue fever virus (DENV);Hepatitis D virus (HDV);Zika virus (ZIKV) MeRIP-seq for host response to Flaviviridae infection MeRIP-seq GPL16791 48
L
Detail
GSE160201 Zika virus (ZIKV) ZIKV prevents host mRNA export from the nucleus by disrupting UPF1 function RNA-seq GPL18573 16
X
E
Detail
GSE161783 Zika virus (ZIKV) Transcriptomic and epigenetic investigation of Zika virus (ZIKV) infection in human monocyte-derived dendritic cells and other cell types Chip-seq
RNA-seq
csRNA-seq
GPL18573
GPL20301
GPL24676
51
X
E
C
L
Detail
GSE176428 Zika virus (ZIKV) Dengue and Zika RNA-RNA interactomes reveal virus permissive and restrictive factors in human cells RNA-seq GPL15520 8
X
E
Detail
GSE178621 Zika virus (ZIKV) Microglia regulate Zika virus infection in human developing brain and glioma RNA-seq GPL24676 28
X
L
Detail
GSE198542 Zika virus (ZIKV) Type I interferons govern Zika virus resistance of human macrophages and microglia RNA-seq GPL18573 12
X
E
L
Detail
GSE209698 Zika virus (ZIKV) Transcriptional profile regulated by 1,25-dihydroxyvitamin D (Calcitriol) in primary Human Monocyte-Derived Macrophages infected by zika virus RNA-seq GPL18573 16
X
E
Detail
GSE78711 Zika virus (ZIKV) Zika Virus Targets Human Cortical Neural Precursors and Attenuates Their Growth RNA-seq GPL15520
GPL18573
8
X
E
L
Detail

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