HBV Target gene Detail Information

> ANKRD42 Gene Search Result


Gene Information
Gene Name ANKRD42
Gene ID 338699
Gene Full Name ankyrin repeat domain 42
Gene Alias PPP1R79|SARP
Transcripts ENSG00000137494
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Cytosol;Plasma membrane;
Membrane Info Predicted intracellular proteins
Uniport_ID Q8N9B4
HGNC ID HGNC:26752
OMIM ID 619778
Summary Predicted to enable NF-kappaB binding activity. Predicted to act upstream of or within positive regulation of NF-kappaB transcription factor activity and positive regulation of cytokine production involved in inflammatory response. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [ANKRD42] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1041912 chr11 9 23 41 73 View
1041913 chr11 12 31 46 89 View

Target gene [ANKRD42] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - ANKRD42 peak across samples

Peak Plot

> Dataset: GSE68402 - ANKRD42 peak across samples

Peak Plot

> Dataset: GSE270130 - ANKRD42 peak across samples

Peak Plot

> Dataset: GSE131257 - ANKRD42 peak across samples

Peak Plot