HTLV1 Target gene Detail Information

> ARHGAP19-SLIT1 Gene Search Result


Gene Information
Gene Name ARHGAP19-SLIT1
Gene ID 100533184
Gene Full Name ARHGAP19-SLIT1 readthrough (NMD candidate)
Gene Alias ARHGAP19
Transcripts ENSG00000269891
Virus HTLV1
Gene Type ncRNA
HGNC ID HGNC:48348
Summary This locus represents naturally occurring read-through transcription between the neighboring Rho GTPase activating protein 19 (ARHGAP19) and slit homolog 1 (SLIT1) genes on chromosome 10. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is thus unlikely to produce a protein product. [provided by RefSeq, Feb 2011]
Target gene [ARHGAP19-SLIT1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000717 chr10 198 472 264 934 View
6019023 chr10 3 3 2 8 View

Target gene [ARHGAP19-SLIT1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ARHGAP19-SLIT1 peak across samples

Peak Plot