HBV Target gene Detail Information

> ASTN2 Gene Search Result


Gene Information
Gene Name ASTN2
Gene ID 23245
Gene Full Name astrotactin 2
Gene Alias bA67K19.1
Transcripts ENSG00000148219
Virus HBV
Gene Type protein-coding
HPA Location Info Cytosol;Nucleoplasm;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID O75129
HGNC ID HGNC:17021
OMIM ID 612856
Summary This gene encodes a protein that is expressed in the brain and may function in neuronal migration, based on functional studies of the related astrotactin 1 gene in human and mouse. A deletion at this locus has been associated with schizophrenia. Multiple transcript variants encoding different proteins have been found for this locus. [provided by RefSeq, May 2010]
Target gene [ASTN2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002462 chr9 10 69 190 269 View
1003906 chr9 71 8 23 102 View
1007048 chr9 20 11 0 31 View
1010283 chr9 0 13 0 13 View
1019493 chr9 0 0 0 0 View
1019928 chr9 0 0 0 0 View
1041607 chr9 0 1 0 1 View

Target gene [ASTN2] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE68402 - ASTN2 peak across samples

Peak Plot

> Dataset: GSE270130 - ASTN2 peak across samples

Peak Plot

> Dataset: GSE131257 - ASTN2 peak across samples

Peak Plot