HBV Target gene Detail Information

> ATP23 Gene Search Result


Gene Information
Gene Name ATP23
Gene ID 91419
Gene Full Name ATP23 metallopeptidase and ATP synthase assembly factor homolog
Gene Alias KUB3|XRCC6BP1
Transcripts ENSG00000166896
Virus HBV
Gene Type protein-coding
HPA Location Info Vesicles, Plasma membrane;Cell Junctions, Cytosol;
Membrane Info Enzymes, Predicted intracellular proteins
Uniport_ID Q9Y6H3
HGNC ID HGNC:29452
OMIM ID 619760
Summary The protein encoded by this gene is amplified in glioblastomas and interacts with the DNA binding subunit of DNA-dependent protein kinase. This kinase is involved in double-strand break repair (DSB), and higher expression of the encoded protein increases the efficiency of DSB. In addition, comparison to orthologous proteins strongly suggests that this protein is a metalloprotease important in the biosynthesis of mitochondrial ATPase. Several transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Feb 2016]
Target gene [ATP23] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1010158 chr12 12 1 0 13 View
1020367 chr12 1 1 0 2 View

Target gene [ATP23] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - ATP23 peak across samples

Peak Plot

> Dataset: GSE68402 - ATP23 peak across samples

Peak Plot

> Dataset: GSE270130 - ATP23 peak across samples

Peak Plot

> Dataset: GSE131257 - ATP23 peak across samples

Peak Plot