HTLV1 Target gene Detail Information

> ATP5F1C Gene Search Result


Gene Information
Gene Name ATP5F1C
Gene ID 509
Gene Full Name ATP synthase F1 subunit gamma
Gene Alias ATP5C|ATP5C1|ATP5CL1
Transcripts ENSG00000165629
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Metabolic proteins, Plasma proteins, Predicted intracellular proteins, Transporters
Uniport_ID P36542
HGNC ID HGNC:833
OMIM ID 108729
Summary This gene encodes a subunit of mitochondrial ATP synthase. Mitochondrial ATP synthase catalyzes ATP synthesis, utilizing an electrochemical gradient of protons across the inner membrane during oxidative phosphorylation. ATP synthase is composed of two linked multi-subunit complexes: the soluble catalytic core, F1, and the membrane-spanning component, Fo, comprising the proton channel. The catalytic portion of mitochondrial ATP synthase consists of 5 different subunits (alpha, beta, gamma, delta, and epsilon) assembled with a stoichiometry of 3 alpha, 3 beta, and a single representative of the other 3. The proton channel consists of three main subunits (a, b, c). This gene encodes the gamma subunit of the catalytic core. Alternatively spliced transcript variants encoding different isoforms have been identified. This gene also has a pseudogene on chromosome 14. [provided by RefSeq, Jul 2008]
Target gene [ATP5F1C] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6006316 chr10 2 60 9 71 View

Target gene [ATP5F1C] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ATP5F1C peak across samples

Peak Plot