HTLV1 Target gene Detail Information

> BABAM2 Gene Search Result


Gene Information
Gene Name BABAM2
Gene ID 9577
Gene Full Name BRISC and BRCA1 A complex member 2
Gene Alias BRCC4|BRCC45|BRE
Transcripts ENSG00000158019
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Metabolic proteins, Predicted intracellular proteins
Uniport_ID Q9NXR7
HGNC ID HGNC:1106
OMIM ID 610497
Summary This gene encodes an anti-apoptotic, death receptor-associated protein that interacts with tumor necrosis factor-receptor-1. The encoded protein acts as an adapter in several protein complexes, including the BRCA1-A complex and the BRISC complex. The BRCA1-A complex possesses ubiquitinase activity and targets sites of double strand DNA breaks, while the BRISC complex exhibits deubiquitinase activity and is involved in mitotic spindle assembly. This gene is upregulated in several types of cancer. [provided by RefSeq, Jun 2016]
Target gene [BABAM2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001270 chr2 166 195 146 507 View
6016720 chr2 1 8 3 12 View

Target gene [BABAM2] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - BABAM2 peak across samples

Peak Plot