Gene Information
|
Gene Name
|
BANCR |
|
Gene ID
|
100885775
|
|
Gene Full Name
|
BRAF-activated non-protein coding RNA |
|
Gene Alias
|
LINC00586 |
|
Transcripts
|
ENSG00000278910
|
|
Virus
|
HPV |
|
Gene Type
|
ncRNA |
|
HGNC ID
|
HGNC:43877
|
|
OMIM ID
|
619589 |
|
lncRNASNP2 ID
|
BANCR
|
|
Summary
|
This gene produces a long non-coding RNA that plays a role in tumor progression and epithelial to mesenchymal transition. This transcript acts through the MAP kinase signaling pathway. [provided by RefSeq, Dec 2017] |
Target gene [BANCR] related to VISs
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 5006556 |
chr9 |
34 |
113 |
4 |
151 |
View |
Target gene [BANCR] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
E TCGA_CESC
|
DNA methylation sequencing;RNA-seq |
288 |
TCGA |
|
C GSE143026
|
ATAC-seq;Chip-seq;RNA-seq |
30 |
Illumina HiSeq 2500 (Homo sapiens) |
|
GSE196215
|
RNA-seq |
8 |
Illumina NovaSeq 6000 (Homo sapiens) |
When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.
> Dataset: TCGA_CESC - BANCR expression across samples
|
Volcano Plot
|
Bar Plot
|
HPV Target gene Detail Information
