Gene Information
|
Gene Name
|
BBS7 |
|
Gene ID
|
55212
|
|
Gene Full Name
|
Bardet-Biedl syndrome 7 |
|
Gene Alias
|
BBS2L1 |
|
Transcripts
|
ENSG00000138686
|
|
Virus
|
HBV |
|
Gene Type
|
protein-coding |
|
HPA Location Info
|
|
|
Membrane Info
|
Disease related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins |
|
Uniport_ID
|
Q8IWZ6
|
|
HGNC ID
|
HGNC:18758
|
|
OMIM ID
|
607590 |
|
Summary
|
This gene encodes one of eight proteins that form the BBSome complex containing BBS1, BBS2, BBS4, BBS5, BBS7, BBS8, BBS9 and BBIP10. The BBSome complex is believed to recruit Rab8(GTP) to the primary cilium and promote ciliogenesis. The BBSome complex assembly is mediated by a complex composed of three chaperonin-like BBS proteins (BBS6, BBS10, and BBS12) and CCT/TRiC family chaperonins. Mutations in this gene are implicated in Bardet-Biedl syndrome, a genetic disorder whose symptoms include obesity, retinal degeneration, polydactyly and nephropathy; however, mutations in this gene and the BBS8 gene are thought to play a minor role and mutations in chaperonin-like BBS genes are found to be a major contributor to disease development in a multiethnic Bardet-Biedl syndrome patient population. Two transcript variants encoding distinct isoforms have been identified for this gene.[provided by RefSeq, Oct 2014] |
Target gene [BBS7] related to VISs
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 1007408 |
chr4 |
27 |
0 |
0 |
27 |
View |
| 1013556 |
chr4 |
3 |
2 |
0 |
5 |
View |
| 1013778 |
chr4 |
3 |
1 |
0 |
4 |
View |
| 1013779 |
chr4 |
3 |
1 |
0 |
4 |
View |
| 1017338 |
chr4 |
0 |
1 |
0 |
1 |
View |
| 1019713 |
chr4 |
0 |
0 |
0 |
0 |
View |
| 1020712 |
chr4 |
3 |
1 |
0 |
4 |
View |
| 1020713 |
chr4 |
27 |
0 |
0 |
27 |
View |
| 1020714 |
chr4 |
3 |
1 |
0 |
4 |
View |
| 1042881 |
chr4 |
32 |
0 |
0 |
32 |
View |
| 1042882 |
chr4 |
4 |
2 |
0 |
6 |
View |
Target gene [BBS7] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
GSE236281
|
RNA-seq |
12 |
Illumina MiSeq (Homo sapiens) |
|
C GSE68402
|
Chip-seq |
26 |
Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens) |
|
TCGA_LIHC_HBV
|
DNA methylation sequencing;RNA-seq |
97 |
TCGA |
|
C GSE270130
|
Chip-seq |
27 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
GSE224901
|
RNA-seq |
21 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
GSE100400
|
Chip-seq;RNA-seq;4C_cccDNA |
31 |
Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus) |
|
GSE173897
|
RNA-seq |
95 |
Illumina HiSeq 4000 (Homo sapiens) |
|
GSE262515
|
RNA-seq |
21 |
Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus) |
|
GSE110345
|
RNA-seq |
4 |
Illumina HiSeq 2500 (Homo sapiens) |
|
GSE131257
|
ATAC-seq;RNA-seq |
19 |
Illumina HiSeq 2500 (Homo sapiens) |
|
GSE94660
|
RNA-seq |
42 |
Illumina HiSeq 2500 (Homo sapiens) |
When the gene can detect a peak in the dataset, a peak plot will be displayed.
> Dataset: GSE68402 - BBS7 peak across samples
|
Peak Plot
|
> Dataset: GSE270130 - BBS7 peak across samples
|
Peak Plot
|
|
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