HTLV1 Target gene Detail Information

> BLOC1S5-TXNDC5 Gene Search Result


Gene Information
Gene Name BLOC1S5-TXNDC5
Gene ID 100526836
Gene Full Name BLOC1S5-TXNDC5 readthrough (NMD candidate)
Gene Alias MUTED-TXNDC5
Transcripts ENSG00000259040
Virus HTLV1
Gene Type ncRNA
HGNC ID HGNC:42001
Summary This locus represents naturally occurring read-through transcription between the neighboring MUTED (muted homolog) and TXNDC5 (thioredoxin domain containing 5) genes on chromosome 6. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD) and is unlikely to produce a protein product. [provided by RefSeq, Dec 2010]
Target gene [BLOC1S5-TXNDC5] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6008326 chr6 46 0 0 46 View
6012684 chr6 12 9 0 21 View

Target gene [BLOC1S5-TXNDC5] related to Omics data
Data ID Experiment type Sample number Platform
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - BLOC1S5-TXNDC5 peak across samples

Peak Plot