HBV Target gene Detail Information

> C13orf42 Gene Search Result


Gene Information
Gene Name C13orf42
Gene ID 647166
Gene Full Name chromosome 13 open reading frame 42
Gene Alias LINC00371|LINC00372
Transcripts ENSG00000226792
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info Predicted intracellular proteins
Uniport_ID A0A1B0GVH6
HGNC ID HGNC:42693
Target gene [C13orf42] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1016157 chr13 1 0 0 1 View
1016645 chr13 0 1 0 1 View

Target gene [C13orf42] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE64877 		Chip-seq 2 Illumina Genome Analyzer (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - C13orf42 peak across samples

Peak Plot

> Dataset: GSE68402 - C13orf42 peak across samples

Peak Plot

> Dataset: GSE131257 - C13orf42 peak across samples

Peak Plot

> Dataset: GSE64877 - C13orf42 peak across samples

Peak Plot