HTLV1 Target gene Detail Information

> C1QTNF3-AMACR Gene Search Result


Gene Information
Gene Name C1QTNF3-AMACR
Gene ID 100534612
Gene Full Name C1QTNF3-AMACR readthrough (NMD candidate)
Gene Alias -
Transcripts ENSG00000273294
Virus HTLV1
Gene Type ncRNA
HGNC ID HGNC:49198
Summary This locus represents naturally occurring read-through transcription between the neighboring C1q and tumor necrosis factor related protein 3 (C1QTNF3) and alpha-methylacyl-CoA racemase (AMACR) genes on chromosome 5. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is thus not likely to produce a protein product. [provided by RefSeq, Mar 2011]
Target gene [C1QTNF3-AMACR] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001480 chr5 398 4 16 418 View
6008288 chr5 18 28 0 46 View
6014076 chr5 15 2 0 17 View
6022303 chr5 2 2 1 5 View

Target gene [C1QTNF3-AMACR] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - C1QTNF3-AMACR peak across samples

Peak Plot