HBV Target gene Detail Information

> C2CD6 Gene Search Result


Gene Information
Gene Name C2CD6
Gene ID 151254
Gene Full Name C2 calcium dependent domain containing 6
Gene Alias ALS2CR11|SPGF68
Transcripts ENSG00000155754
Virus HBV
Gene Type protein-coding
HPA Location Info Principal piece;Acrosome, Equatorial segment;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q53TS8
HGNC ID HGNC:14438
OMIM ID 619776
Summary An autosomal recessive form of juvenile amyotrophic lateral sclerosis was originally mapped to a region of chromosome 2 that includes this gene. The encoded protein contains a calcium-dependent membrane targeting C2 domain. This domain is often found in proteins that are involved in membrane trafficking and signal transduction. [provided by RefSeq, Jun 2016]
Target gene [C2CD6] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1012481 chr2 5 1 0 6 View

Target gene [C2CD6] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - C2CD6 peak across samples

Peak Plot

> Dataset: GSE68402 - C2CD6 peak across samples

Peak Plot

> Dataset: GSE270130 - C2CD6 peak across samples

Peak Plot

> Dataset: GSE131257 - C2CD6 peak across samples

Peak Plot