HPV Target gene Detail Information

> C4orf50 Gene Search Result


Gene Information
Gene Name C4orf50
Gene ID 389197
Gene Full Name chromosome 4 open reading frame 50
Gene Alias -
Transcripts ENSG00000181215
Virus HPV
Gene Type protein-coding
HPA Location Info
Membrane Info Predicted intracellular proteins
HGNC ID HGNC:33766
Target gene [C4orf50] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5001956 chr4 9 7 2 18 View

Target gene [C4orf50] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
M
  TCGA_CESC 		DNA methylation sequencing;RNA-seq 288 TCGA
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE183048 - C4orf50 peak across samples

Peak Plot

> Dataset: GSE143026 - C4orf50 peak across samples

Peak Plot