HBV Target gene Detail Information

> C8orf44-SGK3 Gene Search Result


Gene Information
Gene Name C8orf44-SGK3
Gene ID 100533105
Gene Full Name C8orf44-SGK3 readthrough
Gene Alias -
Transcripts ENSG00000288602
Virus HBV
Gene Type protein-coding
HPA Location Info Vesicles;Nucleoplasm;
Membrane Info Predicted intracellular proteins
HGNC ID HGNC:48354
Summary This locus represents naturally occurring read-through transcription between the neighboring putative uncharacterized protein C8orf44 (GeneID 56260) and serine/threonine-protein kinase Sgk3 (GeneID 23678) genes on chromosome 8. The read-through transcript produces a protein that shares sequence identity with the downstream gene product. [provided by RefSeq, Feb 2011]
Target gene [C8orf44-SGK3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1041574 chr8 11 11 2 24 View

Target gene [C8orf44-SGK3] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - C8orf44-SGK3 peak across samples

Peak Plot

> Dataset: GSE68402 - C8orf44-SGK3 peak across samples

Peak Plot

> Dataset: GSE270130 - C8orf44-SGK3 peak across samples

Peak Plot

> Dataset: GSE100400 - C8orf44-SGK3 peak across samples

Peak Plot

> Dataset: GSE131257 - C8orf44-SGK3 peak across samples

Peak Plot