Gene Information
|
Gene Name
|
CACNA1S |
|
Gene ID
|
779
|
|
Gene Full Name
|
calcium voltage-gated channel subunit alpha1 S |
|
Gene Alias
|
CACNL1A3|CCHL1A3|CMYO18|CMYP18|Cav1.1|DHPRM|HOKPP|HOKPP1|MHS5|TTPP1|hypoPP |
|
Transcripts
|
ENSG00000081248
|
|
Virus
|
HBV |
|
Gene Type
|
protein-coding |
|
HPA Location Info
|
Acrosome, Equatorial segment; 
|
|
Membrane Info
|
Disease related genes, FDA approved drug targets, Human disease related genes, Predicted membrane proteins, Transporters, Voltage-gated ion channels |
|
Uniport_ID
|
Q13698
|
|
HGNC ID
|
HGNC:1397
|
|
OMIM ID
|
114208 |
|
Summary
|
This gene encodes one of the five subunits of the slowly inactivating L-type voltage-dependent calcium channel in skeletal muscle cells. Mutations in this gene have been associated with hypokalemic periodic paralysis, thyrotoxic periodic paralysis and malignant hyperthermia susceptibility. [provided by RefSeq, Jul 2008] |
Target gene [CACNA1S] related to VISs 
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 1011121 |
chr1 |
9 |
1 |
0 |
10 |
View |
| 1012348 |
chr1 |
7 |
0 |
0 |
7 |
View |
Target gene [CACNA1S] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
GSE236281
|
RNA-seq |
12 |
Illumina MiSeq (Homo sapiens) |
|
C GSE35465
|
Chip-seq;RNA-seq |
6 |
Illumina HiSeq 2000 (Homo sapiens) |
|
C GSE68402
|
Chip-seq |
26 |
Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens) |
|
TCGA_LIHC_HBV
|
DNA methylation sequencing;RNA-seq |
97 |
TCGA |
|
C GSE270130
|
Chip-seq |
27 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
GSE224901
|
RNA-seq |
21 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
GSE100400
|
Chip-seq;RNA-seq;4C_cccDNA |
31 |
Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus) |
|
GSE173897
|
RNA-seq |
95 |
Illumina HiSeq 4000 (Homo sapiens) |
|
GSE262515
|
RNA-seq |
21 |
Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus) |
|
GSE110345
|
RNA-seq |
4 |
Illumina HiSeq 2500 (Homo sapiens) |
|
C GSE131257
|
ATAC-seq;RNA-seq |
19 |
Illumina HiSeq 2500 (Homo sapiens) |
|
GSE94660
|
RNA-seq |
42 |
Illumina HiSeq 2500 (Homo sapiens) |
When the gene can detect a peak in the dataset, a peak plot will be displayed.
> Dataset: GSE35465 - CACNA1S peak across samples
|
Peak Plot
|
> Dataset: GSE68402 - CACNA1S peak across samples
|
Peak Plot
|
> Dataset: GSE270130 - CACNA1S peak across samples
|
Peak Plot
|
> Dataset: GSE131257 - CACNA1S peak across samples
|
Peak Plot
|
|
|
HBV Target gene Detail Information
