HBV Target gene Detail Information

> CACNB2 Gene Search Result


Gene Information
Gene Name CACNB2
Gene ID 783
Gene Full Name calcium voltage-gated channel auxiliary subunit beta 2
Gene Alias CAB2|CACNLB2|CAVB2|MYSB
Transcripts ENSG00000165995
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info Disease related genes, FDA approved drug targets, Human disease related genes, Predicted intracellular proteins, Transporters
Uniport_ID Q08289
HGNC ID HGNC:1402
OMIM ID 600003
Summary This gene encodes a subunit of a voltage-dependent calcium channel protein that is a member of the voltage-gated calcium channel superfamily. The gene product was originally identified as an antigen target in Lambert-Eaton myasthenic syndrome, an autoimmune disorder. Mutations in this gene are associated with Brugada syndrome. Alternatively spliced variants encoding different isoforms have been described. [provided by RefSeq, Feb 2013]
Target gene [CACNB2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003295 chr10 22 65 60 147 View
1004257 chr10 26 44 17 87 View
1009929 chr10 4 10 0 14 View
1012192 chr10 4 3 0 7 View
1013411 chr10 5 0 0 5 View
1020079 chr10 13 1 0 14 View
1020166 chr10 3 3 0 6 View

Target gene [CACNB2] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
 
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - CACNB2 expression across samples

Volcano Plot

Bar Plot