HPV Target gene Detail Information

> CAVIN4 Gene Search Result


Gene Information
Gene Name CAVIN4
Gene ID 347273
Gene Full Name caveolae associated protein 4
Gene Alias MURC|cavin-4
Transcripts ENSG00000170681
Virus HPV
Gene Type protein-coding
HPA Location Info Golgi apparatus, Plasma membrane;Nucleoplasm;
Membrane Info Predicted intracellular proteins
Uniport_ID Q5BKX8
HGNC ID HGNC:33742
OMIM ID 617714
Summary This gene encodes a protein containing two coiled-coil regions. The encoded protein promotes Rho/ROCK (Rho-kinase) signaling in cardiac muscles cells, and may facilitate myofibrillar organization. [provided by RefSeq, Jun 2013]
Target gene [CAVIN4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5011134 chr9 1 1 0 2 View

Target gene [CAVIN4] related to Omics data
Data ID Experiment type Sample number Platform
E
  TCGA_CESC 		DNA methylation sequencing;RNA-seq 288 TCGA
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: TCGA_CESC - CAVIN4 expression across samples

Volcano Plot

Bar Plot