HTLV1 Target gene Detail Information

> CCAT1 Gene Search Result


Gene Information
Gene Name CCAT1
Gene ID 100507056
Gene Full Name colon cancer associated transcript 1
Gene Alias CARLO5|CARLo-5|onco-lncRNA-40
Virus HTLV1
Gene Type ncRNA
HGNC ID HGNC:45128
OMIM ID 617705
Summary This gene produces a long non-coding RNA that promotes tumor formation and is upregulated in colon cancer and other cancer cell types. This transcript may regulate long range chromosomal interactions, including at the Myc oncoprotein locus. This RNA may also function as a molecular sponge for microRNAs. [provided by RefSeq, Dec 2017]
Target gene [CCAT1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6010133 chr8 31 1 1 33 View

Target gene [CCAT1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC