HBV Target gene Detail Information

> CD163L1 Gene Search Result


Gene Information
Gene Name CD163L1
Gene ID 283316
Gene Full Name CD163 molecule like 1
Gene Alias CD163B|M160|SCARI2|STAR|WC1
Transcripts ENSG00000177675
Virus HBV
Gene Type protein-coding
HPA Location Info Centrosome, Cytosol;Nucleoplasm;Intracellular and membrane;
Membrane Info CD markers, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9NR16
HGNC ID HGNC:30375
OMIM ID 606079
Summary This gene encodes a member of the scavenger receptor cysteine-rich (SRCR) superfamily. Members of this family are secreted or membrane-anchored proteins mainly found in cells associated with the immune system. The SRCR family is defined by a 100-110 amino acid SRCR domain, which may mediate protein-protein interaction and ligand binding. The encoded protein contains twelve SRCR domains, a transmembrane region and a cytoplasmic domain. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Jul 2014]
Target gene [CD163L1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005301 chr12 53 2 1 56 View
1009723 chr12 12 1 1 14 View
1012261 chr12 1 6 0 7 View
1012266 chr12 1 6 0 7 View
1012337 chr12 1 6 0 7 View
1013080 chr12 5 0 0 5 View
1023200 chr12 53 2 1 56 View
1023201 chr12 5 0 0 5 View
1023202 chr12 12 1 1 14 View
1041950 chr12 5 1 0 6 View
1041951 chr12 12 2 1 15 View
1041952 chr12 68 3 2 73 View

Target gene [CD163L1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - CD163L1 expression across samples

Volcano Plot

Bar Plot