HBV Target gene Detail Information

> CDIN1 Gene Search Result


Gene Information
Gene Name CDIN1
Gene ID 84529
Gene Full Name CDAN1 interacting nuclease 1
Gene Alias C15orf41|HH114
Transcripts ENSG00000186073
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q9Y2V0
HGNC ID HGNC:26929
OMIM ID 615626
Summary This gene encodes a protein with two predicted helix-turn-helix domains. Mutations in this gene were found in families with congenital dyserythropoietic anemia type Ib. Alternative splicing results in multiple transcript variants encoding different isoforms. [provided by RefSeq, Mar 2014]
Target gene [CDIN1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1016276 chr15 0 0 1 1 View
1016277 chr15 0 0 1 1 View
1019484 chr15 0 0 0 0 View
1023088 chr15 0 0 1 1 View
1023089 chr15 0 0 1 1 View
1042117 chr15 3 6 7 16 View
1042118 chr15 0 0 2 2 View
1042119 chr15 0 1 3 4 View

Target gene [CDIN1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE35465
Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402
Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
C
  GSE270130
Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400
Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257
ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
E
  GSE94660
RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE94660 - CDIN1 expression across samples

Volcano Plot


Bar Plot