HBV Target gene Detail Information

> CLSTN2 Gene Search Result


Gene Information
Gene Name CLSTN2
Gene ID 64084
Gene Full Name calsyntenin 2
Gene Alias ALC-GAMMA|CDHR13|CS2|CSTN2|alcagamma
Transcripts ENSG00000158258
Virus HBV
Gene Type protein-coding
HPA Location Info Vesicles;Cytokinetic bridge;
Membrane Info Predicted membrane proteins
Uniport_ID Q9H4D0
HGNC ID HGNC:17448
OMIM ID 611323
Summary Predicted to enable calcium ion binding activity. Predicted to be involved in positive regulation of synapse assembly and positive regulation of synaptic transmission. Predicted to be located in several cellular components, including Golgi membrane; endoplasmic reticulum membrane; and postsynaptic density. Predicted to be active in cell surface; glutamatergic synapse; and postsynaptic density membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [CLSTN2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1006041 chr3 5 34 5 44 View
1007556 chr3 18 4 4 26 View
1014384 chr3 1 2 0 3 View
1015736 chr3 2 0 0 2 View
1015737 chr3 2 0 0 2 View
1015738 chr3 2 0 0 2 View
1019316 chr3 0 0 0 0 View
1023650 chr3 1 2 0 3 View

Target gene [CLSTN2] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
GSE199850 scRNA-seq 1 HiSeq X Ten (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE68402 - CLSTN2 peak across samples

Peak Plot

> Dataset: GSE270130 - CLSTN2 peak across samples

Peak Plot

> Dataset: GSE100400 - CLSTN2 peak across samples

Peak Plot

> Dataset: GSE131257 - CLSTN2 peak across samples

Peak Plot