HBV Target gene Detail Information

> CNNM1 Gene Search Result


Gene Information
Gene Name CNNM1
Gene ID 26507
Gene Full Name cyclin and CBS domain divalent metal cation transport mediator 1
Gene Alias ACDP1|CLP-1|SLC70A1
Transcripts ENSG00000119946
Virus HBV
Gene Type protein-coding
HPA Location Info Plasma membrane, Cytosol;
Membrane Info Predicted membrane proteins, Transporters
Uniport_ID Q9NRU3
HGNC ID HGNC:102
OMIM ID 607802
Summary This gene encodes a member of the ancient conserved domain protein family. The encoded protein may bind copper. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Sep 2016]
Target gene [CNNM1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000633 chr10 57 912 767 1736 View
1000636 chr10 57 909 764 1730 View

Target gene [CNNM1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - CNNM1 peak across samples

Peak Plot

> Dataset: GSE68402 - CNNM1 peak across samples

Peak Plot

> Dataset: GSE270130 - CNNM1 peak across samples

Peak Plot

> Dataset: GSE131257 - CNNM1 peak across samples

Peak Plot