HPV Target gene Detail Information

> CNTN4-AS2 Gene Search Result


Gene Information
Gene Name CNTN4-AS2
Gene ID 100873976
Gene Full Name CNTN4 antisense RNA 2
Gene Alias -
Transcripts ENSG00000227588
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:39986
lncRNASNP2 ID CNTN4-AS2
Target gene [CNTN4-AS2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5017474 chr3 1130 386 388 1904 View
5017475 chr3 1130 392 394 1916 View

Target gene [CNTN4-AS2] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - CNTN4-AS2 peak across samples

Peak Plot