Gene Information
|
Gene Name
|
CNTNAP5 |
|
Gene ID
|
129684
|
|
Gene Full Name
|
contactin associated protein family member 5 |
|
Gene Alias
|
caspr5 |
|
Transcripts
|
ENSG00000155052
|
|
Virus
|
HBV |
|
Gene Type
|
protein-coding |
|
HPA Location Info
|
Nucleoli fibrillar center;Nucleoplasm, Vesicles; 
|
|
Membrane Info
|
Predicted membrane proteins |
|
Uniport_ID
|
Q8WYK1
|
|
HGNC ID
|
HGNC:18748
|
|
OMIM ID
|
610519 |
|
Summary
|
This gene product belongs to the neurexin family, members of which function in the vertebrate nervous system as cell adhesion molecules and receptors. This protein, like other neurexin proteins, contains epidermal growth factor repeats and laminin G domains. In addition, it includes an F5/8 type C domain, discoidin/neuropilin- and fibrinogen-like domains, and thrombospondin N-terminal-like domains. [provided by RefSeq, Jul 2008] |
Target gene [CNTNAP5] related to VISs 
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 1011666 |
chr2 |
6 |
1 |
1 |
8 |
View |
| 1016804 |
chr2 |
0 |
0 |
1 |
1 |
View |
| 1016805 |
chr2 |
0 |
0 |
1 |
1 |
View |
| 1020441 |
chr2 |
13 |
0 |
0 |
13 |
View |
| 1042525 |
chr2 |
6 |
4 |
0 |
10 |
View |
Target gene [CNTNAP5] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
GSE236281
|
RNA-seq |
12 |
Illumina MiSeq (Homo sapiens) |
|
C GSE68402
|
Chip-seq |
26 |
Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens) |
|
TCGA_LIHC_HBV
|
DNA methylation sequencing;RNA-seq |
97 |
TCGA |
|
C GSE270130
|
Chip-seq |
27 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
GSE224901
|
RNA-seq |
21 |
Illumina NovaSeq 6000 (Homo sapiens) |
|
C GSE100400
|
Chip-seq;RNA-seq;4C_cccDNA |
31 |
Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus) |
|
GSE173897
|
RNA-seq |
95 |
Illumina HiSeq 4000 (Homo sapiens) |
|
GSE262515
|
RNA-seq |
21 |
Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus) |
|
GSE110345
|
RNA-seq |
4 |
Illumina HiSeq 2500 (Homo sapiens) |
|
C GSE131257
|
ATAC-seq;RNA-seq |
19 |
Illumina HiSeq 2500 (Homo sapiens) |
|
GSE94660
|
RNA-seq |
42 |
Illumina HiSeq 2500 (Homo sapiens) |
When the gene can detect a peak in the dataset, a peak plot will be displayed.
> Dataset: GSE68402 - CNTNAP5 peak across samples
|
Peak Plot
|
> Dataset: GSE270130 - CNTNAP5 peak across samples
|
Peak Plot
|
> Dataset: GSE100400 - CNTNAP5 peak across samples
|
Peak Plot
|
> Dataset: GSE131257 - CNTNAP5 peak across samples
|
Peak Plot
|
|
|
HBV Target gene Detail Information
