HTLV1 Target gene Detail Information

> COP1 Gene Search Result


Gene Information
Gene Name COP1
Gene ID 64326
Gene Full Name COP1 E3 ubiquitin ligase
Gene Alias CFAP78|FAP78|RFWD2|RNF200
Transcripts ENSG00000143207
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Enzymes, Metabolic proteins, Predicted intracellular proteins
Uniport_ID Q8NHY2
HGNC ID HGNC:17440
OMIM ID 608067
Summary Enables ubiquitin protein ligase activity. Involved in positive regulation of proteasomal ubiquitin-dependent protein catabolic process; proteasome-mediated ubiquitin-dependent protein catabolic process; and response to ionizing radiation. Part of Cul4A-RING E3 ubiquitin ligase complex. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [COP1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003716 chr1 109 36 0 145 View
6010910 chr1 25 2 1 28 View
6015230 chr1 2 12 0 14 View
6015237 chr1 2 12 0 14 View
6016467 chr1 9 2 1 12 View

Target gene [COP1] related to Omics data
Data ID Experiment type Sample number Platform
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - COP1 peak across samples

Peak Plot