HPV Target gene Detail Information

> CORO7-PAM16 Gene Search Result


Gene Information
Gene Name CORO7-PAM16
Gene ID 100529144
Gene Full Name CORO7-PAM16 readthrough
Gene Alias CORO7|Coronin-7|Crn7
Transcripts ENSG00000103426
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Mitochondria;Microtubules;
Membrane Info Predicted intracellular proteins
HGNC ID HGNC:44424
Summary This locus represents naturally occurring read-through transcription between the neighboring CORO7 (coronin 7) and PAM16 (presequence translocase-associated motor 16) genes on chromosome 16. The read-through transcript encodes a fusion protein that shares sequence identity with each individual gene product. [provided by RefSeq, Jan 2011]
Target gene [CORO7-PAM16] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5015098 chr16 17 39 2 58 View
5015099 chr16 20 27 2 49 View

Target gene [CORO7-PAM16] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - CORO7-PAM16 peak across samples

Peak Plot