HPV Target gene Detail Information

> CPLANE1 Gene Search Result


Gene Information
Gene Name CPLANE1
Gene ID 65250
Gene Full Name ciliogenesis and planar polarity effector complex subunit 1
Gene Alias C5orf42|Hug|JBTS17|OFD6
Transcripts ENSG00000197603
Virus HPV
Gene Type protein-coding
HPA Location Info Cytosol, Mid piece, Principal piece;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9H799
HGNC ID HGNC:25801
OMIM ID 614571
Summary The protein encoded by this gene has putative coiled-coil domains and may be a transmembrane protein. Defects in this gene are a cause of Joubert syndrome (JBTS). [provided by RefSeq, May 2012]
Target gene [CPLANE1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5015994 chr5 109 14 2 125 View

Target gene [CPLANE1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - CPLANE1 peak across samples

Peak Plot

> Dataset: GSE143026 - CPLANE1 peak across samples

Peak Plot