HBV Target gene Detail Information

> CSMD3 Gene Search Result


Gene Information
Gene Name CSMD3
Gene ID 114788
Gene Full Name CUB and Sushi multiple domains 3
Gene Alias -
Transcripts ENSG00000164796
Virus HBV
Gene Type protein-coding
HPA Location Info Plasma membrane;
Membrane Info Predicted membrane proteins
Uniport_ID Q7Z407
HGNC ID HGNC:19291
OMIM ID 608399
Summary Predicted to be involved in regulation of dendrite development. Predicted to be located in plasma membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [CSMD3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005936 chr8 39 4 2 45 View
1015520 chr8 0 1 1 2 View
1016651 chr8 1 0 0 1 View
1017312 chr8 0 1 0 1 View
1019809 chr8 0 0 0 0 View
1019811 chr8 0 0 0 0 View
1019812 chr8 0 0 0 0 View
1020057 chr8 3 0 0 3 View
1021174 chr8 39 4 2 45 View
1043398 chr8 1 0 0 1 View
1043399 chr8 42 8 7 57 View

Target gene [CSMD3] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
 
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - CSMD3 expression across samples

Volcano Plot

Bar Plot