HPV Target gene Detail Information

> CYTOR Gene Search Result


Gene Information
Gene Name CYTOR
Gene ID 112597
Gene Full Name cytoskeleton regulator RNA
Gene Alias C2orf59|LINC00152|NCRNA00152
Transcripts ENSG00000222041
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:28717
lncRNASNP2 ID CYTOR
Summary This gene produces a long non-coding RNA that is overexpressed in cancer cells and promotes cell proliferation and epithelial-mesenchymal transition. This RNA may bind enhancer of zeste homolog 2 and participate in the transcriptional silencing of tumor suppressor genes. It may act as a sponge for microRNAs. Alternatively spliced variants have been observed. [provided by RefSeq, Dec 2017]
Target gene [CYTOR] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5013206 chr2 99 79 61 239 View
5013207 chr2 41 0 2 43 View

Target gene [CYTOR] related to Omics data
Data ID Experiment type Sample number Platform
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
S
  GSE164690
scRNA-seq 51 Illumina NextSeq 500 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE143026 ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a feature/violin plot will be displayed.


> Dataset: GSE164690 - Gene expression in cell subsets