HBV Target gene Detail Information

> DCDC1 Gene Search Result


Gene Information
Gene Name DCDC1
Gene ID 341019
Gene Full Name doublecortin domain containing 1
Gene Alias DCDC5
Transcripts ENSG00000170959
Virus HBV
Gene Type protein-coding
HPA Location Info
Membrane Info Predicted intracellular proteins
Uniport_ID M0R2J8
HGNC ID HGNC:20625
OMIM ID 608062
Summary This gene encodes a member of the doublecortin family. The protein encoded by this gene is a hydrophilic, intracellular protein. It contains a single doublecortin domain and is unable to bind microtubules and to regulate microtubule polymerization. This gene is mainly expressed in adult testis. It does not have a mouse homolog. [provided by RefSeq, Sep 2010]
Target gene [DCDC1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1012922 chr11 2 4 0 6 View
1018345 chr11 0 0 0 0 View
1020316 chr11 4 1 0 5 View
1041021 chr11 16 6 1 23 View
1041873 chr11 34 0 0 34 View

Target gene [DCDC1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - DCDC1 peak across samples

Peak Plot

> Dataset: GSE68402 - DCDC1 peak across samples

Peak Plot

> Dataset: GSE270130 - DCDC1 peak across samples

Peak Plot

> Dataset: GSE100400 - DCDC1 peak across samples

Peak Plot

> Dataset: GSE131257 - DCDC1 peak across samples

Peak Plot