HBV Target gene Detail Information

> DCHS2 Gene Search Result


Gene Information
Gene Name DCHS2
Gene ID 54798
Gene Full Name dachsous cadherin-related 2
Gene Alias CDH27|CDHJ|CDHR7|PCDH23|PCDHJ
Transcripts ENSG00000197410
Virus HBV
Gene Type protein-coding
HPA Location Info Vesicles, Plasma membrane;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q6V1P9
HGNC ID HGNC:23111
OMIM ID 612486
Summary This gene encodes a large protein that contains many cadherin domains and likely functions in cell adhesion. Genome-wide association studies suggest that this gene may be important in Alzheimer's disease, compressive strength index, and appendicular lean mass. [provided by RefSeq, May 2017]
Target gene [DCHS2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1017269 chr4 0 1 0 1 View
1019942 chr4 0 0 0 0 View

Target gene [DCHS2] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - DCHS2 peak across samples

Peak Plot

> Dataset: GSE68402 - DCHS2 peak across samples

Peak Plot

> Dataset: GSE270130 - DCHS2 peak across samples

Peak Plot

> Dataset: GSE100400 - DCHS2 peak across samples

Peak Plot

> Dataset: GSE131257 - DCHS2 peak across samples

Peak Plot