HBV Target gene Detail Information

> DNAAF4 Gene Search Result


Gene Information
Gene Name DNAAF4
Gene ID 161582
Gene Full Name dynein axonemal assembly factor 4
Gene Alias CILD25|DYX1|DYX1C1|DYXC1|EKN1|RD|pf23
Transcripts ENSG00000256061
Virus HBV
Gene Type protein-coding
HPA Location Info Cytosol, Mid piece;Plasma membrane, Connecting piece, Principal piece;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q8WXU2
HGNC ID HGNC:21493
OMIM ID 608706
Summary This gene encodes a tetratricopeptide repeat domain-containing protein. The encoded protein interacts with estrogen receptors and the heat shock proteins, Hsp70 and Hsp90. An homologous protein in rat has been shown to function in neuronal migration in the developing neocortex. A chromosomal translocation involving this gene is associated with a susceptibility to developmental dyslexia. Mutations in this gene are associated with deficits in reading and spelling. Alternative splicing results in multiple transcript variants. Read-through transcription also exists between this gene and the downstream cell cycle progression 1 (CCPG1) gene. [provided by RefSeq, Mar 2011]
Target gene [DNAAF4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1014468 chr15 3 0 0 3 View
1015068 chr15 3 0 0 3 View
1021649 chr15 3 0 0 3 View

Target gene [DNAAF4] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - DNAAF4 peak across samples

Peak Plot

> Dataset: GSE68402 - DNAAF4 peak across samples

Peak Plot

> Dataset: GSE270130 - DNAAF4 peak across samples

Peak Plot

> Dataset: GSE131257 - DNAAF4 peak across samples

Peak Plot