HPV Target gene Detail Information

> DNAAF4-CCPG1 Gene Search Result


Gene Information
Gene Name DNAAF4-CCPG1
Gene ID 100533483
Gene Full Name DNAAF4-CCPG1 readthrough (NMD candidate)
Gene Alias DYX1C1-CCPG1
Transcripts ENSG00000261771
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:43019
Summary This locus represents naturally occurring read-through transcription between the neighboring dyslexia susceptibility 1 candidate 1 (DYX1C1) and cell cycle progression 1 (CCPG1) genes on chromosome 15. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is thus unlikely to produce a protein product. [provided by RefSeq, Mar 2011]
Target gene [DNAAF4-CCPG1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5017160 chr15 2 0 0 2 View
5017161 chr15 2 0 0 2 View

Target gene [DNAAF4-CCPG1] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - DNAAF4-CCPG1 peak across samples

Peak Plot