HBV Target gene Detail Information

> DTX2P1-UPK3BP1-PMS2P11 Gene Search Result


Gene Information
Gene Name DTX2P1-UPK3BP1-PMS2P11
Gene ID 441263
Gene Full Name DTX2P1-UPK3BP1-PMS2P11 readthrough, transcribed pseudogene
Gene Alias PMS2L11
Transcripts ENSG00000265479
Virus HBV
Gene Type pseudo
HGNC ID HGNC:42360
Summary This locus represents naturally-occurring readthrough transcription spanning multiple pseudogenes: DTX2P1 (DTX2 pseudogene 1), UPK3BP1 (uroplakin 3B pseudogene 1), PMS2P11 (PMS1 homolog 2, mismatch repair system component pseudogene 11). Some transcripts may also extend to PMS2P9 (PMS1 homolog 2, mismatch repair system component pseudogene 9). The readthrough transcripts likely do not encode functional proteins. [provided by RefSeq, Jan 2016]
Target gene [DTX2P1-UPK3BP1-PMS2P11] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1043244 chr7 29 2 11 42 View

Target gene [DTX2P1-UPK3BP1-PMS2P11] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - DTX2P1-UPK3BP1-PMS2P11 peak across samples

Peak Plot

> Dataset: GSE270130 - DTX2P1-UPK3BP1-PMS2P11 peak across samples

Peak Plot

> Dataset: GSE131257 - DTX2P1-UPK3BP1-PMS2P11 peak across samples

Peak Plot