HBV Target gene Detail Information

> EPCAM-DT Gene Search Result


Gene Information
Gene Name EPCAM-DT
Gene ID 101927043
Gene Full Name EPCAM divergent transcript
Gene Alias -
Transcripts ENSG00000234690
Virus HBV
Gene Type ncRNA
HGNC ID HGNC:52639
Target gene [EPCAM-DT] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1003824 chr2 42 25 39 106 View
1003827 chr2 42 25 39 106 View
1016311 chr2 0 1 0 1 View
1016312 chr2 0 1 0 1 View
1016313 chr2 0 1 0 1 View
1016314 chr2 0 1 0 1 View
1016434 chr2 0 1 0 1 View
1016435 chr2 0 1 0 1 View
1016436 chr2 0 1 0 1 View
1024643 chr2 1 0 0 1 View
1042489 chr2 237 38 90 365 View

Target gene [EPCAM-DT] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE35465
Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402
Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130
Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
  GSE100400
Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE131257
ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - EPCAM-DT expression across samples

Volcano Plot


Bar Plot