HTLV1 Target gene Detail Information

> ERVH48-1 Gene Search Result


Gene Information
Gene Name ERVH48-1
Gene ID 90625
Gene Full Name endogenous retrovirus group 48 member 1, envelope
Gene Alias C21orf105|NDUFV3-AS1|SUPYN
Transcripts ENSG00000233056
Virus HTLV1
Gene Type protein-coding
HPA Location Info Secreted in female reproductive system;
Membrane Info Predicted secreted proteins
Uniport_ID M5A8F1
HGNC ID HGNC:17216
Summary Many different endogenous retrovirus families are expressed in normal placental tissue at high levels, suggesting that endogenous retroviruses are functionally important in reproduction. This gene is part of an endogenous retrovirus provirus that has placenta specific expression. The protein encoded has the characteristics of a retroviral envelope protein but is truncated and lacks the transmembrane domain. The protein inhibits cell fusion by competing with syncytin-1 for binding to a cell receptor. [provided by RefSeq, May 2015]
Target gene [ERVH48-1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6007336 chr21 55 2 0 57 View

Target gene [ERVH48-1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ERVH48-1 peak across samples

Peak Plot