HTLV1 Target gene Detail Information

> FKBP1A-SDCBP2 Gene Search Result


Gene Information
Gene Name FKBP1A-SDCBP2
Gene ID 100528031
Gene Full Name FKBP1A-SDCBP2 readthrough (NMD candidate)
Gene Alias -
Virus HTLV1
Gene Type ncRNA
HGNC ID HGNC:41997
Summary This locus represents naturally occurring read-through transcription between the neighboring FK506 binding protein 1A, 12kDa and syndecan binding protein (syntenin) 2 genes on chromosome 20. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is unlikely to produce a protein product. [provided by RefSeq, Dec 2010]
Target gene [FKBP1A-SDCBP2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004231 chr20 4 107 12 123 View

Target gene [FKBP1A-SDCBP2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - FKBP1A-SDCBP2 peak across samples

Peak Plot