HBV Target gene Detail Information

> FN1 Gene Search Result


Gene Information
Gene Name FN1
Gene ID 2335
Gene Full Name fibronectin 1
Gene Alias CIG|ED-B|FINC|FN|FNZ|GFND|GFND2|LETS|MSF|SMDCF
Transcripts ENSG00000115414
Virus HBV
Gene Type protein-coding
HPA Location Info Secreted to blood;
Membrane Info Cancer-related genes, Candidate cardiovascular disease genes, Disease related genes, FDA approved drug targets, Human disease related genes, Plasma proteins, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID P02751
HGNC ID HGNC:3778
OMIM ID 135600
Summary This gene encodes fibronectin, a glycoprotein present in a soluble dimeric form in plasma, and in a dimeric or multimeric form at the cell surface and in extracellular matrix. The encoded preproprotein is proteolytically processed to generate the mature protein. Fibronectin is involved in cell adhesion and migration processes including embryogenesis, wound healing, blood coagulation, host defense, and metastasis. The gene has three regions subject to alternative splicing, with the potential to produce 20 different transcript variants, at least one of which encodes an isoform that undergoes proteolytic processing. The full-length nature of some variants has not been determined. [provided by RefSeq, Jan 2016]
Target gene [FN1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000449 chr2 1628 392 229 2249 View
1001232 chr2 734 118 21 873 View
1001910 chr2 39 315 70 424 View
1001915 chr2 39 315 68 422 View
1002128 chr2 307 24 4 335 View
1002191 chr2 294 22 3 319 View
1002193 chr2 294 22 3 319 View
1002194 chr2 294 22 3 319 View
1002549 chr2 229 18 2 249 View
1002617 chr2 21 193 22 236 View
1002728 chr2 24 183 7 214 View
1002744 chr2 146 49 16 211 View
1002747 chr2 68 88 54 210 View
1002826 chr2 143 45 13 201 View
1002890 chr2 180 12 1 193 View
1002908 chr2 179 11 1 191 View
1002932 chr2 108 60 23 191 View
1003133 chr2 152 9 1 162 View
1003153 chr2 151 8 1 160 View
1003199 chr2 6 146 5 157 View
1003223 chr2 31 66 57 154 View
1003361 chr2 48 64 28 140 View
1003362 chr2 48 64 28 140 View
1003437 chr2 54 78 2 134 View
1003569 chr2 91 53 4 148 View
1003570 chr2 91 53 4 148 View
1003571 chr2 91 53 4 148 View
1003572 chr2 91 53 4 148 View
1003573 chr2 91 53 4 148 View
1003574 chr2 91 53 4 148 View
1003575 chr2 91 53 4 148 View
1003576 chr2 53 62 9 124 View
1003584 chr2 55 68 0 123 View
1003602 chr2 52 62 8 122 View
1003606 chr2 52 62 8 122 View
1003618 chr2 67 67 7 141 View
1003619 chr2 67 67 7 141 View
1003658 chr2 20 49 49 118 View
1003733 chr2 100 13 0 113 View
1003744 chr2 51 42 19 112 View
1003874 chr2 98 3 3 104 View
1003893 chr2 9 49 45 103 View
1003923 chr2 1 97 3 101 View
1004011 chr2 57 36 4 97 View
1004083 chr2 43 33 18 94 View
1004135 chr2 80 7 4 91 View
1004136 chr2 80 7 4 91 View
1004169 chr2 40 33 17 90 View
1004170 chr2 67 17 6 90 View
1004260 chr2 64 23 0 87 View
1004300 chr2 51 31 4 86 View
1004320 chr2 76 7 2 85 View
1004353 chr2 53 27 4 84 View
1004384 chr2 65 13 5 83 View
1004396 chr2 65 13 5 83 View
1004558 chr2 49 24 4 77 View
1004559 chr2 49 24 4 77 View
1004623 chr2 67 7 0 74 View
1004658 chr2 44 22 7 73 View
1004685 chr2 43 22 7 72 View
1004721 chr2 42 28 1 71 View
1004723 chr2 42 28 1 71 View
1004793 chr2 39 30 0 69 View
1004817 chr2 46 19 3 68 View
1004818 chr2 46 19 3 68 View
1005176 chr2 16 10 33 59 View
1005218 chr2 17 10 31 58 View
1005365 chr2 47 7 2 56 View
1005366 chr2 26 25 5 56 View
1005470 chr2 36 16 2 54 View
1005473 chr2 36 16 2 54 View
1005497 chr2 26 22 5 53 View
1005512 chr2 38 19 0 57 View
1005552 chr2 21 23 8 52 View
1005653 chr2 30 18 2 50 View
1005787 chr2 32 14 2 48 View
1005844 chr2 24 18 8 50 View
1005992 chr2 39 3 3 45 View
1005999 chr2 39 3 3 45 View
1006007 chr2 39 3 2 44 View
1006024 chr2 11 33 0 44 View
1006060 chr2 37 6 1 44 View
1006066 chr2 39 3 3 45 View
1006074 chr2 28 14 2 44 View
1006075 chr2 28 14 2 44 View
1006235 chr2 20 9 12 41 View
1006256 chr2 27 12 2 41 View
1006324 chr2 16 24 0 40 View
1006473 chr2 15 20 3 38 View
1006538 chr2 29 8 0 37 View
1006545 chr2 29 8 0 37 View
1006699 chr2 19 14 2 35 View
1006717 chr2 20 14 1 35 View
1006720 chr2 18 11 6 35 View
1006722 chr2 18 11 6 35 View
1006794 chr2 23 11 0 34 View
1006797 chr2 34 0 0 34 View
1007046 chr2 30 1 0 31 View
1007099 chr2 16 12 2 30 View
1007163 chr2 13 9 8 30 View
1007209 chr2 29 0 0 29 View
1007220 chr2 29 0 0 29 View
1007224 chr2 27 2 0 29 View
1007225 chr2 27 2 0 29 View
1007237 chr2 18 11 0 29 View
1007244 chr2 22 4 3 29 View
1007299 chr2 15 12 1 28 View
1007300 chr2 15 12 1 28 View
1007315 chr2 19 7 2 28 View
1007358 chr2 21 7 0 28 View
1007383 chr2 16 10 2 28 View
1007505 chr2 24 2 1 27 View
1007528 chr2 25 1 0 26 View
1007560 chr2 17 7 2 26 View
1007590 chr2 18 8 0 26 View
1007596 chr2 10 8 8 26 View
1007627 chr2 18 7 0 25 View
1007720 chr2 16 9 0 25 View
1007721 chr2 5 12 8 25 View
1007722 chr2 5 12 8 25 View
1007852 chr2 14 10 0 24 View
1007867 chr2 15 9 0 24 View
1007870 chr2 15 9 0 24 View
1007957 chr2 13 4 6 23 View
1007958 chr2 13 4 6 23 View
1008000 chr2 18 2 3 23 View
1008017 chr2 19 2 2 23 View
1008018 chr2 16 7 0 23 View
1008019 chr2 23 0 0 23 View
1008021 chr2 23 0 0 23 View
1008031 chr2 19 4 0 23 View
1008106 chr2 13 7 2 22 View
1008420 chr2 3 18 0 21 View
1008431 chr2 15 6 0 21 View
1008443 chr2 15 6 0 21 View
1008526 chr2 13 7 0 20 View
1008548 chr2 2 13 5 20 View
1008572 chr2 2 13 5 20 View
1008602 chr2 16 4 0 20 View
1008634 chr2 13 7 0 20 View
1008808 chr2 16 3 0 19 View
1008881 chr2 15 4 0 19 View
1008882 chr2 15 4 0 19 View
1009121 chr2 17 0 0 17 View
1009122 chr2 17 0 0 17 View
1009193 chr2 17 0 0 17 View
1009194 chr2 17 0 0 17 View
1009211 chr2 11 6 0 17 View
1009212 chr2 15 2 0 17 View
1009216 chr2 17 0 0 17 View
1009228 chr2 11 5 1 17 View
1009230 chr2 11 5 1 17 View
1009231 chr2 1 16 0 17 View
1009246 chr2 11 5 1 17 View
1009307 chr2 10 6 0 16 View
1009308 chr2 11 5 0 16 View
1009398 chr2 12 2 2 16 View
1009412 chr2 14 2 0 16 View
1009515 chr2 6 9 0 15 View
1009570 chr2 2 11 2 15 View
1009596 chr2 2 11 2 15 View
1009672 chr2 13 2 0 15 View
1009757 chr2 9 1 4 14 View
1009772 chr2 6 8 0 14 View
1009853 chr2 11 3 0 14 View
1009884 chr2 8 6 0 14 View
1009885 chr2 8 6 0 14 View
1009924 chr2 12 2 0 14 View
1009950 chr2 12 2 0 14 View
1010122 chr2 8 5 0 13 View
1010152 chr2 11 2 0 13 View
1010189 chr2 10 1 2 13 View
1010209 chr2 6 4 3 13 View
1010219 chr2 9 4 0 13 View
1010225 chr2 9 4 0 13 View
1010344 chr2 8 4 0 12 View
1010345 chr2 8 4 0 12 View
1010370 chr2 10 1 1 12 View
1010390 chr2 9 3 0 12 View
1010398 chr2 10 1 1 12 View
1010399 chr2 10 1 1 12 View
1010456 chr2 12 0 0 12 View
1010525 chr2 12 0 0 12 View
1010535 chr2 10 2 0 12 View
1010658 chr2 0 11 0 11 View
1010659 chr2 0 11 0 11 View
1010669 chr2 9 1 1 11 View
1010676 chr2 0 11 0 11 View
1010701 chr2 11 0 0 11 View
1010702 chr2 11 0 0 11 View
1010790 chr2 11 0 0 11 View
1010830 chr2 0 11 0 11 View
1011032 chr2 7 3 0 10 View
1011050 chr2 8 2 0 10 View
1011143 chr2 9 1 0 10 View
1011212 chr2 7 3 0 10 View
1011345 chr2 6 3 0 9 View
1011346 chr2 6 3 0 9 View
1011384 chr2 4 5 0 9 View
1011389 chr2 3 6 0 9 View
1011393 chr2 6 3 0 9 View
1011394 chr2 6 3 0 9 View
1011403 chr2 9 0 0 9 View
1011519 chr2 6 3 0 9 View
1011530 chr2 6 3 0 9 View
1011559 chr2 6 3 0 9 View
1011815 chr2 6 2 0 8 View
1011957 chr2 6 2 0 8 View
1012138 chr2 4 3 0 7 View
1012252 chr2 7 0 0 7 View
1012376 chr2 1 6 0 7 View
1012408 chr2 7 0 0 7 View
1012443 chr2 7 0 0 7 View
1012461 chr2 4 3 0 7 View
1012591 chr2 6 0 0 6 View
1012593 chr2 4 2 0 6 View
1012609 chr2 5 1 0 6 View
1012610 chr2 5 1 0 6 View
1012623 chr2 5 1 0 6 View
1012624 chr2 5 1 0 6 View
1012781 chr2 5 1 0 6 View
1012782 chr2 5 1 0 6 View
1012851 chr2 4 2 0 6 View
1013007 chr2 4 2 0 6 View
1013008 chr2 4 2 0 6 View
1013155 chr2 2 3 0 5 View
1013189 chr2 3 2 0 5 View
1013196 chr2 5 0 0 5 View
1013197 chr2 5 0 0 5 View
1013198 chr2 5 0 0 5 View
1013453 chr2 3 2 0 5 View
1013454 chr2 3 0 2 5 View
1013530 chr2 2 0 3 5 View
1013603 chr2 1 1 3 5 View
1013713 chr2 3 1 0 4 View
1013792 chr2 2 2 0 4 View
1013793 chr2 3 1 0 4 View
1013806 chr2 1 3 0 4 View
1013966 chr2 1 3 0 4 View
1014026 chr2 2 1 1 4 View
1014027 chr2 2 1 1 4 View
1014125 chr2 4 0 0 4 View
1014239 chr2 1 3 0 4 View
1014517 chr2 0 3 0 3 View
1014712 chr2 3 0 0 3 View
1014713 chr2 3 0 0 3 View
1014737 chr2 1 2 0 3 View
1014753 chr2 3 0 0 3 View
1014754 chr2 3 0 0 3 View
1014904 chr2 3 0 0 3 View
1015056 chr2 2 1 0 3 View
1015098 chr2 3 0 0 3 View
1015378 chr2 2 0 0 2 View
1015380 chr2 2 0 0 2 View
1015421 chr2 1 1 0 2 View
1015422 chr2 1 1 0 2 View
1015437 chr2 0 2 0 2 View
1015438 chr2 0 2 0 2 View
1015477 chr2 2 0 0 2 View
1015478 chr2 2 0 0 2 View
1015570 chr2 2 0 0 2 View
1015597 chr2 2 0 0 2 View
1015598 chr2 2 0 0 2 View
1015618 chr2 2 0 0 2 View
1015619 chr2 2 0 0 2 View
1015867 chr2 2 0 0 2 View
1015961 chr2 2 0 0 2 View
1015973 chr2 1 1 0 2 View
1016442 chr2 1 0 0 1 View
1016444 chr2 0 0 1 1 View
1016479 chr2 1 0 0 1 View
1016531 chr2 1 0 0 1 View
1016532 chr2 1 0 0 1 View
1016537 chr2 1 0 0 1 View
1016538 chr2 1 0 0 1 View
1017244 chr2 1 0 0 1 View
1017343 chr2 1 0 0 1 View
1017348 chr2 1 0 0 1 View
1017378 chr2 1 0 0 1 View
1017379 chr2 1 0 0 1 View
1017465 chr2 1 0 0 1 View
1018047 chr2 0 0 0 0 View
1020255 chr2 1 3 0 4 View
1023208 chr2 31 66 57 154 View
1023280 chr2 3 1 0 4 View
1023996 chr2 18 3 0 21 View
1023997 chr2 4 2 0 6 View
1024030 chr2 15 4 0 19 View
1024041 chr2 14 1 0 15 View
1024183 chr2 10 0 0 10 View
1024197 chr2 11 6 0 17 View
1024219 chr2 5 5 0 10 View
1024263 chr2 9 3 0 12 View
1024319 chr2 5 6 0 11 View
1024371 chr2 0 5 0 5 View
1024394 chr2 360 32 9 401 View
1024461 chr2 1424 2203 927 4554 View
1024477 chr2 3 1 67 71 View
1024564 chr2 2 0 0 2 View
1024780 chr2 22 1 1 24 View
1039798 chr2 27 14 2 43 View
1039799 chr2 27 14 2 43 View
1039800 chr2 27 14 2 43 View
1039801 chr2 27 14 2 43 View
1039802 chr2 27 14 2 43 View
1039803 chr2 27 14 2 43 View
1039804 chr2 27 14 2 43 View
1039805 chr2 27 14 2 43 View
1039806 chr2 27 14 2 43 View
1039807 chr2 27 14 2 43 View
1039808 chr2 27 14 2 43 View
1039809 chr2 27 14 2 43 View
1039810 chr2 27 13 2 42 View
1039811 chr2 27 13 2 42 View
1039812 chr2 27 13 2 42 View
1039813 chr2 27 13 2 42 View
1039814 chr2 27 13 2 42 View
1039815 chr2 27 13 2 42 View
1039816 chr2 27 13 2 42 View
1039817 chr2 27 13 2 42 View
1039818 chr2 27 13 2 42 View
1039819 chr2 27 13 2 42 View
1039820 chr2 27 13 2 42 View
1039821 chr2 27 13 2 42 View
1039822 chr2 27 13 2 42 View
1039823 chr2 27 13 2 42 View
1039824 chr2 27 13 2 42 View
1039825 chr2 27 13 2 42 View
1039826 chr2 27 13 2 42 View
1039827 chr2 27 13 2 42 View
1039828 chr2 27 13 2 42 View
1039829 chr2 27 13 2 42 View
1039830 chr2 27 13 2 42 View
1039831 chr2 27 13 2 42 View
1039832 chr2 27 13 2 42 View
1039833 chr2 27 13 2 42 View
1039834 chr2 27 13 2 42 View
1039835 chr2 27 13 2 42 View
1039836 chr2 27 13 2 42 View
1039837 chr2 27 13 2 42 View
1039838 chr2 27 13 2 42 View
1039839 chr2 27 13 2 42 View
1039840 chr2 27 13 2 42 View
1039841 chr2 27 13 2 42 View
1039842 chr2 27 13 2 42 View
1039843 chr2 27 13 2 42 View
1039844 chr2 27 13 2 42 View
1039845 chr2 27 13 2 42 View
1039846 chr2 27 13 2 42 View
1039847 chr2 27 13 2 42 View
1039848 chr2 27 13 2 42 View
1039849 chr2 27 13 2 42 View
1039850 chr2 27 13 2 42 View
1039851 chr2 27 13 2 42 View
1039852 chr2 27 13 2 42 View
1039853 chr2 27 13 2 42 View
1039854 chr2 27 13 2 42 View
1039855 chr2 27 13 2 42 View
1039856 chr2 27 13 2 42 View
1039857 chr2 27 13 2 42 View
1039858 chr2 27 13 2 42 View
1039859 chr2 27 13 2 42 View
1039860 chr2 27 13 2 42 View
1039861 chr2 27 13 2 42 View
1039862 chr2 27 13 2 42 View
1039863 chr2 27 13 2 42 View
1039864 chr2 27 13 2 42 View
1039865 chr2 27 13 2 42 View
1039866 chr2 27 13 2 42 View
1039867 chr2 27 12 2 41 View
1039868 chr2 27 12 2 41 View
1039869 chr2 27 12 2 41 View
1039870 chr2 27 12 2 41 View
1039871 chr2 27 12 2 41 View
1039872 chr2 27 12 2 41 View
1039873 chr2 27 12 2 41 View
1041295 chr2 27 27 0 54 View
1041296 chr2 8 5 1 14 View
1041297 chr2 9 5 1 15 View
1041298 chr2 12 27 48 87 View
1041299 chr2 14 19 20 53 View
1041300 chr2 14 19 20 53 View
1041301 chr2 92 38 29 159 View
1041302 chr2 52 5 0 57 View
1041303 chr2 2 8 2 12 View
1041304 chr2 6 5 0 11 View
1041305 chr2 6 5 0 11 View
1041306 chr2 4 1 0 5 View
1041307 chr2 3 3 41 47 View
1041308 chr2 69 45 6 120 View
1041309 chr2 7 3 0 10 View
1041310 chr2 10 3 0 13 View
1041311 chr2 137 107 15 259 View
1041312 chr2 12 3 0 15 View
1041313 chr2 60 2 0 62 View
1041314 chr2 17 6 0 23 View
1041315 chr2 7 1 0 8 View
1041316 chr2 2610 668 450 3728 View
1041317 chr2 2691 679 446 3816 View
1042567 chr2 5 11 0 16 View
1042568 chr2 4 1 0 5 View
1042569 chr2 7 2 1 10 View
1042570 chr2 1 3 0 4 View
1042571 chr2 6 2 1 9 View
1042572 chr2 5 2 0 7 View
1042573 chr2 4 2 2 8 View
1042574 chr2 3 0 1 4 View
1042575 chr2 0 0 0 0 View
1042576 chr2 1 0 0 1 View
1042577 chr2 6 3 0 9 View
1042578 chr2 14 4 0 18 View
1042579 chr2 2 0 1 3 View
1042580 chr2 22 22 11 55 View
1042581 chr2 27 25 10 62 View
1042582 chr2 24 0 0 24 View
1042583 chr2 6 4 0 10 View
1042584 chr2 7 2 0 9 View
1042585 chr2 6 2 0 8 View
1042586 chr2 4 4 0 8 View
1042587 chr2 6 8 0 14 View
1042588 chr2 17 4 0 21 View
1042589 chr2 6 0 0 6 View
1042590 chr2 1 0 6 7 View
1042591 chr2 1 0 0 1 View
1042592 chr2 1 0 0 1 View
1042593 chr2 2 0 0 2 View
1042594 chr2 4 2 0 6 View
1042595 chr2 12 3 2 17 View
1042596 chr2 10 2 5 17 View
1042597 chr2 7 0 0 7 View
1042598 chr2 7 0 0 7 View
1042599 chr2 7 0 0 7 View
1042600 chr2 9 4 0 13 View
1042601 chr2 6 0 0 6 View
1042602 chr2 5 0 0 5 View
1042603 chr2 9 1 2 12 View
1042604 chr2 9 1 2 12 View
1042605 chr2 9 1 2 12 View
1042606 chr2 7 0 0 7 View
1042607 chr2 113 438 112 663 View
1042608 chr2 125 441 117 683 View
1042609 chr2 132 446 122 700 View
1042610 chr2 29 2 0 31 View
1042611 chr2 25 28 39 92 View
1042612 chr2 39 91 57 187 View
1042613 chr2 47 111 63 221 View
1042614 chr2 60 135 72 267 View
1042615 chr2 61 138 78 277 View
1042616 chr2 4 0 0 4 View
1042617 chr2 11 0 0 11 View
1042618 chr2 65 3 5 73 View
1042619 chr2 78 3 0 81 View
1042620 chr2 76 3 0 79 View
1042621 chr2 395 31 7 433 View
1042622 chr2 429 34 9 472 View
1042623 chr2 568 49 7 624 View
1042624 chr2 690 62 11 763 View
1042625 chr2 1186 182 38 1406 View
1043527 chr2 6 3 0 9 View
1043528 chr2 23 306 53 382 View

Target gene [FN1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
S
  GSE199850 		scRNA-seq 1 HiSeq X Ten (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
E
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE100400 - FN1 expression across samples

Volcano Plot

Bar Plot