HTLV1 Target gene Detail Information

> GABRR3 Gene Search Result


Gene Information
Gene Name GABRR3
Gene ID 200959
Gene Full Name gamma-aminobutyric acid type A receptor subunit rho3
Gene Alias -
Transcripts ENSG00000183185
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Predicted membrane proteins
Uniport_ID A8MPY1
HGNC ID HGNC:17969
OMIM ID 618668
Summary The neurotransmitter gamma-aminobutyric acid (GABA) functions in the central nervous system to regulate synaptic transmission of neurons. This gene encodes one of three related subunits, which combine as homo- or hetero-pentamers to form GABA(C) receptors. In humans, some individuals contain a single-base polymorphism (dbSNP rs832032) that is predicted to inactivate the gene product. [provided by RefSeq, Jan 2012]
Target gene [GABRR3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6009791 chr3 19 16 0 35 View
6015241 chr3 12 1 1 14 View
6017009 chr3 6 5 0 11 View

Target gene [GABRR3] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - GABRR3 peak across samples

Peak Plot